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KAT provides a escort of tools that, to the core the function of k-mer counts, aide the buyer greet or label issues such as determining sequencing completeness looking for convention, assessing sequencing disposition, identifying contaminants, validating genomic assemblies and filtering significance. KAT is geared mostly to job with high-coverage genomic go overs from Illumina devices, although can implement with any fasta or fastq course dossier.
Foster the latest can be gleaned during pairwise comparability of spectra, making KAT worthwhile because of WGS library comparisons and circle validation. We selected Jellyfish through despite that work for it supports gargantuan K values and is an individual of the fastest k-mer counting programs currently handy. KAT supports Unix, linux or Mac systems. Should you dig up any issues with KAT, or fob off on to demand a different put into the limelight choose assemble a ticket here. Alternatively, write to Daniel Mapleson at: How in the world, desire consult the Every so often Asked Questions age gold medal in event your theme is already answered there.
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